Learning Resources

This section provides a curated collection of external resources for bioimage analysis, training materials, and useful tools.

Image Analysis Resources

Software and Tools Collections

• Awesome Biological Image Analysis - A comprehensive list of software, tools, pipelines, and plugins for biological image analysis

Learning Materials

• BiA-PoL blog - Blog with examples of image analysis pipelines
• Introduction to Bioimage Analysis - Comprehensive guide to bioimage analysis
• Image analysis with Python - Data Carpentry lessons on image processing with Python
• Bio-image Analysis Notebooks - Interactive notebooks for learning bioimage analysis

Training Videos and Courses

• COBA: Center for Open Bioimage Analysis - Video tutorials on CellProfiler and image analysis
• Virtual I2K 2024 - Workshops on different image analysis tools
• GloBIAS - YouTube channel of GloBIAS, the Global BioImage Analysts’ Society
• Euro-BioImaging
• Crick BioImage Analysis Symposium

Online Resources

• Image analysis forum Image.sc
• Dutch Microscopy society - NVvM

Conferences and Events

Conference Events Resources

• ELMI Conference Database - Database with microscopy conferences